TWAROCK, REIDUN: search on Z-Library

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1

Structural constraints on the three-dimensional geometry of simple viruses: case studies of a new predictive tool

Keef, Thomas, Wardman, Jessica P., Ranson, Neil A., Stockley, Peter G., Twarock, Reidun

Journal:

Acta Crystallographica Section A Foundations of Crystallography

Year:

2013

Language:

english

File:

PDF, 1.83 MB

english, 2013

2

Structural puzzles in virology solved with an overarching icosahedral design principle

Twarock, Reidun, Luque, Antoni

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 2.21 MB

english, 2019

3

The physics of virus assembly

Stockley, Peter G, Twarock, Reidun

Journal:

Physical Biology

Year:

2010

Language:

english

File:

PDF, 301 KB

english, 2010

4

Novel Kac–Moody-type affine extensions of non-crystallographic Coxeter groups

Dechant, Pierre-Philippe, Bœhm, Céline, Twarock, Reidun

Journal:

Journal of Physics A Mathematical and Theoretical

Year:

2012

Language:

english

File:

PDF, 509 KB

english, 2012

5

Affine extension of noncrystallographic Coxeter groups and quasicrystals

Patera, Jirí, Twarock, Reidun

Journal:

Journal of Physics A: Mathematical and General Physics

Year:

2002

Language:

english

File:

PDF, 205 KB

english, 2002

6

Representations of Uh(su(N)) derived from quantum flag manifolds

Šťovı́ček, Pavel, Twarock, Reidun

Journal:

Journal of Mathematical Physics

Year:

1997

Language:

english

File:

PDF, 548 KB

english, 1997

7

Degenerate RNA Packaging Signals in the Genome of Satellite Tobacco Necrosis Virus: Implications for the Assembly of a T = 1 Capsid

David H.J. Bunka, Stephen W. Lane, Claire L. Lane, Eric C. Dykeman, Robert J. Ford, Amy M. Barker, Reidun Twarock, Simon E.V. Phillips, Peter G. Stockley

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 2.19 MB

english, 2011

8

RNA-Mediated Virus Assembly: Mechanisms and Consequences for Viral Evolution and Therapy

Twarock, Reidun, Stockley, Peter G.

Journal:

Annual Review of Biophysics

Year:

2019

Language:

english

File:

PDF, 2.81 MB

english, 2019

9

Viruses and fullerenes – symmetry as a common thread?

Dechant, Pierre-Philippe, Wardman, Jess, Keef, Tom, Twarock, Reidun

Journal:

Acta Crystallographica Section A Foundations and Advances

Year:

2014

Language:

english

File:

PDF, 609 KB

english, 2014

10

RNA Virus Evolution via a Quasispecies-Based Model Reveals a Drug Target with a High Barrier to Resistance

Bingham, Richard, Dykeman, Eric, Twarock, Reidun

Journal:

Year:

2017

Language:

english

File:

PDF, 1.34 MB

english, 2017

11

HBV RNA pre-genome encodes specific motifs that mediate interactions with the viral core protein that promote nucleocapsid assembly

Patel, Nikesh, White, Simon J., Thompson, Rebecca F., Bingham, Richard, Weiß, Eva U., Maskell, Daniel P., Zlotnick, Adam, Dykeman, Eric C., Tuma, Roman, Twarock, Reidun, Ranson, Neil A., Stockley, Pet

Journal:

Nature Microbiology

Year:

2017

Language:

english

File:

PDF, 5.30 MB

english, 2017

12

Conservation of Genetically-Embedded Virus Assembly Instructions: A Novel Route to Antiviral Therapy

Twarock, Reidun, Stockley, Peter G., Bingham, Richard J., Dykeman, Eric C., Dechant, Pierre-Philippe

Journal:

Proceedings (American Bar Association. Section of International and Comparative Law)

Year:

2020

File:

PDF, 133 KB

2020

13

Emerging Topics in Physical Virology || An Overview of Capsid Assembly Kinetics

Stockley, Peter G, Twarock, Reidun

Year:

2010

Language:

english

File:

PDF, 1.92 MB

english, 2010

14

On the interaction mechanisms of a p53 peptide and nutlin with the MDM2 and MDMX proteins: A Brownian dynamics study

ElSawy, Karim, Verma, Chandra S., Joseph, Thomas Leonard, Lane, David P., Twarock, Reidun, Caves, Leo

Journal:

Year:

2013

Language:

english

File:

PDF, 1.52 MB

english, 2013

15

Genomic RNA folding mediates assembly of human parechovirus

Shakeel, Shabih, Dykeman, Eric C., White, Simon J., Ora, Ari, Cockburn, Joseph J.B., Butcher, Sarah J., Stockley, Peter G., Twarock, Reidun

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 2.03 MB

english, 2017

16

Surface stresses in complex viral capsids and non-quasi-equivalent viral architectures

Indelicato, Giuliana, Cermelli, Paolo, Twarock, Reidun

Journal:

Journal of The Royal Society Interface

Year:

2020

File:

PDF, 3.86 MB

2020

17

Intra- and intermolecular atomic-scale interactions in the receptor binding domain of SARS-CoV-2 spike protein: implication for ACE2 receptor binding

Adhikari, Puja, Li, Neng, Shin, Matthew, Steinmetz, Nicole F., Twarock, Reidun, Podgornik, Rudolf, Ching, Wai-Yim

Journal:

Physical Chemistry Chemical Physics

Year:

2020

File:

PDF, 8.47 MB

2020

18

Quasicrystal Lie algebras and their generalizations

Jiřı́ Patera, Reidun Twarock

Journal:

Physics Reports

Year:

1999

Language:

english

File:

PDF, 165 KB

english, 1999

19

Quadratic algebras in traffic flow models

Twarock, Reidun

Journal:

Reports on Mathematical Physics

Year:

2003

Language:

english

File:

PDF, 610 KB

english, 2003

20

A MATHEMATICAL APPROACH TO STRUCTURAL TRANSITIONS IN VIRAL CAPSIDS

INDELICATO, GIULIANA, TWAROCK, REIDUN

Journal:

International Journal of Modern Physics Conference Series

Year:

2012

Language:

english

File:

PDF, 919 KB

english, 2012

21

Packaging Signals in Two Single-Stranded RNA Viruses Imply a Conserved Assembly Mechanism and Geometry of the Packaged Genome

Dykeman, Eric C., Stockley, Peter G., Twarock, Reidun

Journal:

Journal of Molecular Biology

Year:

2013

Language:

english

File:

PDF, 2.38 MB

english, 2013

22

Packaging signals in single-stranded RNA viruses: nature’s alternative to a purely electrostatic assembly mechanism

Peter G. Stockley, Reidun Twarock, Saskia E. Bakker…

Journal:

Journal of Biological Physics

Year:

2013

Language:

english

File:

PDF, 761 KB

english, 2013

23

Direct Evidence for Packaging Signal-Mediated Assembly of Bacteriophage MS2

Rolfsson, Óttar, Middleton, Stefani, Manfield, Iain W., White, Simon J., Fan, Baochang, Vaughan, Robert, Ranson, Neil A., Dykeman, Eric, Twarock, Reidun, Ford, James, Cheng Kao, C., Stockley, Peter G.

Journal:

Journal of Molecular Biology

Year:

2016

Language:

english

File:

PDF, 2.58 MB

english, 2016

24

Polyomaviridae Assembly Polymorphism from an Energy Landscape Perspective

ElSawy, Karim M., Caves, Leo S. D., Twarock, Reidun

Journal:

Computational and Mathematical Methods in Medicine

Year:

2008

Language:

english

File:

PDF, 553 KB

english, 2008

25

The Three-dimensional Structure of Genomic RNA in Bacteriophage MS2: Implications for Assembly

Katerina Toropova, Gabriella Basnak, Reidun Twarock, Peter G. Stockley, Neil A. Ranson

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 2.16 MB

english, 2008

26

Structural puzzles in virology solved with an overarching icosahedral design principle

Twarock, Reidun, Luque, Antoni

Journal:

Nature Communications

Year:

2019

File:

PDF, 2.21 MB

2019

27

A CALOGERO–SUTHERLAND MODEL BASED ON THE APERIODIC VIRASORO ALGEBRA

TWAROCK, REIDUN

Journal:

International Journal of Modern Physics A

Year:

2000

Language:

english

File:

PDF, 192 KB

english, 2000

28

Publisher's Note: “Affine extensions of non-crystallographic Coxeter groups induced by projection” [J. Math. Phys. 54, 093508 (2013)]

Dechant, Pierre-Philippe, Bœhm, Céline, Twarock, Reidun

Journal:

Journal of Mathematical Physics

Year:

2013

Language:

english

File:

PDF, 39 KB

english, 2013

29

Virasoro-type algebras associated with a Penrose tiling

Mazorchuk, Volodymyr, Twarock, Reidun

Journal:

Journal of Physics A: Mathematical and General Physics

Year:

2003

Language:

english

File:

PDF, 186 KB

english, 2003

30

Principles Governing the Self-Assembly of Coiled-Coil Protein Nanoparticles

Indelicato, Giuliana, Wahome, Newton, Ringler, Philippe, Müller, Shirley A., Nieh, Mu-Ping, Burkhard, Peter, Twarock, Reidun

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 4.41 MB

english, 2016

31

Characterization of the Ligand Receptor Encounter Complex and Its Potential for in Silico Kinetics-Based Drug Development

ElSawy, Karim M., Twarock, Reidun, Lane, David P., Verma, Chandra S., Caves, Leo S. D.

Journal:

Journal of Chemical Theory and Computation

Year:

2012

Language:

english

File:

PDF, 3.68 MB

english, 2012

32

Structural transformations in quasicrystals induced by higher dimensional lattice transitions

Giuliana Indelicato, Tom Keef, Paolo Cermelli, David G. Salthouse, Reidun Twarock and Giovanni Zanzotto

Journal:

Proceedings Mathematical Physical & Engineering Sciences

Year:

2012

Language:

english

File:

PDF, 2.06 MB

english, 2012

33

Impact of Hydrogen Bonding in Binding Site Between Capsid Protein and MS2 Bacteriophage ssRNA

Poudel, Lokendra, Twarock, Reidun, Steinmetz, Nicole F., Podgornik, Rudolf, Ching, Wai-Yim

Journal:

Journal of Physical Chemistry B

Year:

2017

Language:

english

File:

PDF, 3.41 MB

english, 2017

34

Revealing the density of encoded functions in a viral RNA

Patel, Nikesh, Dykeman, Eric C., Coutts, Robert H. A., Lomonossoff, George P., Rowlands, David J., Phillips, Simon E. V., Ranson, Neil, Twarock, Reidun, Tuma, Roman, Stockley, Peter G.

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 1.52 MB

english, 2015

35

Asymmetric Genome Organization in an RNA Virus Revealed via Graph-Theoretical Analysis of Tomographic Data

Geraets, James A., Dykeman, Eric C., Stockley, Peter G., Ranson, Neil A., Twarock, Reidun, Wilke, Claus O.

Journal:

PLoS Computational Biology

Year:

2015

Language:

english

File:

PDF, 4.08 MB

english, 2015

36

A modelling paradigm for RNA virus assembly

Twarock, Reidun, Bingham, Richard J, Dykeman, Eric C, Stockley, Peter G

Journal:

Current Opinion in Virology

Year:

2018

Language:

english

File:

PDF, 1.89 MB

english, 2018

37

Orbits of crystallographic embedding of non-crystallographic groups and applications to virology

Twarock, Reidun, Valiunas, Motiejus, Zappa, Emilio

Journal:

Acta Crystallographica Section A Foundations and Advances

Year:

2015

Language:

english

File:

PDF, 876 KB

english, 2015

38

A Multi-Scale Model of Virus Pandemic: Heterogeneous Interactive Entities in a Globally Connected World

Bellomo, Nicola, Bingham, Richard, Chaplain, Mark A. J., Dosi, Giovanni, Forni, Guido, Knopoff, Damian A., Lowengrub, John, Twarock, Reidun, Virgillito, Maria Enrica

Journal:

Mathematical Models and Methods in Applied Sciences

Year:

2020

File:

PDF, 1.95 MB

2020

39

A Mathematical Physicist's Approach to Virology

Twarock, Reidun

Journal:

Journal of Physics Conference Series

Year:

2012

Language:

english

File:

PDF, 7.13 MB

english, 2012

40

The Impact of Viral RNA on Assembly Pathway Selection

Victoria L. Morton, Eric C. Dykeman, Nicola J. Stonehouse, Alison E. Ashcroft, Reidun Twarock, Peter G. Stockley

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 1.26 MB

english, 2010

41

Viral Genome Conformations and Contacts across Different Lifecycle Stages

Stockley, Peter G., Patel, Nikesh, Wroblewski, Emma L., Scott, Andrew J. P., Mata, Carlos P., Chandler-Bostock, Rebecca, Barker, Amy M., Twarock, Reidun, Clark, Sam, Bingham, Richard J.

Journal:

Proceedings (American Bar Association. Section of International and Comparative Law)

Year:

2020

File:

PDF, 149 KB

2020

42

Nonicosahedral pathways for capsid expansion

Cermelli, Paolo, Indelicato, Giuliana, Twarock, Reidun

Journal:

Physical Review E

Year:

2013

Language:

english

File:

PDF, 1.51 MB

english, 2013

43

Emerging Topics in Physical Virology || BACK MATTER

Stockley, Peter G, Twarock, Reidun

Year:

2010

Language:

english

File:

PDF, 32 KB

english, 2010

44

Emerging Topics in Physical Virology || Assembly and Disassembly of Deltahedral Viral Shells

Stockley, Peter G, Twarock, Reidun

Year:

2010

Language:

english

File:

PDF, 1.02 MB

english, 2010

45

Quasicrystal Lie algebras

Jiří Patera, Edita Pelantová, Reidun Twarock

Journal:

Physics Letters A

Year:

1998

Language:

english

File:

PDF, 502 KB

english, 1998

46

The Impact of Viral RNA on the Association Rates of Capsid Protein Assembly: Bacteriophage MS2 as a Case Study

Karim M. ElSawy, Leo S.D. Caves, Reidun Twarock

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 2.21 MB

english, 2010

47

Mathematical Virology

McLeish, Tom, Stockley, Peter, Twarock, Reidun

Journal:

Journal of Theoretical Medicine

Year:

2005

Language:

english

File:

PDF, 195 KB

english, 2005

48

Mechanical and Assembly Units of Viral Capsids Identified via Quasi-Rigid Domain Decomposition

Polles, Guido, Indelicato, Giuliana, Potestio, Raffaello, Cermelli, Paolo, Twarock, Reidun, Micheletti, Cristian, Schlessinger, Avner

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 1.73 MB

english, 2013

49

Rewriting nature’s assembly manual for a ssRNA virus

Patel, Nikesh, Wroblewski, Emma, Leonov, German, Phillips, Simon E. V., Tuma, Roman, Twarock, Reidun, Stockley, Peter G.

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 1.35 MB

english, 2017

50

Hamiltonian path analysis of viral genomes

Twarock, Reidun, Leonov, German, Stockley, Peter G.

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.67 MB

english, 2018

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